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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15314 and 15315 are separated by 636 nucleotides
15315 and 15316 are separated by 1199 nucleotides
15316 and 15317 are separated by 385 nucleotides
15317 and 15318 are separated by 1022 nucleotides
mRNA_6946: 15314 - K04713 SUR2 sphinganine C4-monooxygenase, at 499,195 to 500,447
15314
mRNA_6947: 15315 - K02555 MIH1 M-phase inducer tyrosine phosphatase, at 501,084 to 504,114
15315
mRNA_6948: 15316 - BLAST putative ephrin type-a receptor 8-like protein [Botry..., at 505,314 to 506,461
15316
mRNA_6949: 15317 - HMMPfam-Cenp-O kinetochore centromere component-PF09496, at 506,847 to 507,636
15317
mRNA_6950: 15318 - KOG4505 Na+/H+ antiporter, at 508,659 to 510,404
15318
Group
Condition
mRNA
_6946
mRNA
_6947
mRNA
_6948
mRNA
_6949
mRNA
_6950
15314
15315
15316
15317
15318
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.2
-0.4
-3.8
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
+0.2
-0.4
-3.5
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.2
-0.3
-2.9
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.1
+0.0
-1.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.4
-0.3
-1.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.4
-0.4
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.2
-0.5
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
-0.0
+0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.2
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.0
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.7
+0.3
-0.7
auxotrophy
Dropout Complete
N.D.
N.D.
-0.1
+0.2
+0.3
auxotrophy
YNB Glucose
N.D.
N.D.
-0.1
+0.4
+0.2
growth on ypd
YPD
N.D.
N.D.
-0.0
+0.6
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.4
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.3
+0.3
+0.3
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.5
+0.1
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.3
+0.2
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.4
+0.6
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.3
+0.5
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+0.1
+0.7
+0.6
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