Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15319 and 15320 are separated by 280 nucleotides15320 and 15321 are separated by 128 nucleotides15321 and 15322 are separated by 410 nucleotides15322 and 15323 are separated by 652 nucleotides mRNA_6951: 15319 - ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065, at 510,991 to 511,843 15319 mRNA_6952: 15320 - K11858 USP48 ubiquitin carboxyl-terminal hydrolase 48, at 512,124 to 517,290 15320 mRNA_6953: 15321 - K13719 OTU1, YOD1 ubiquitin thioesterase OTU1, at 517,419 to 518,782 15321 mRNA_6954: 15322 - K10591 NEDD4, RSP5 E3 ubiquitin-protein ligase NEDD4, at 519,193 to 522,362 15322 mRNA_6955: 15323 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 523,015 to 527,499 15323
Group Condition mRNA_6951 mRNA_6952 mRNA_6953 mRNA_6954 mRNA_6955
15319 15320 15321 15322 15323
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.9 -0.2 N.D. -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.6 -0.4 N.D. -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.4 -0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.0 +0.2 N.D. -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.2 +0.4 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.4 -0.2 +0.1 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.0 +0.6 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.1 -0.0 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.4 -0.2 N.D. +0.1
growth on ypd YPD +0.0 +0.3 -0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 +0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 -0.2 -0.1 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.6 -0.2 +0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.7 -0.1 -0.0 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.1 -0.0 N.D. +0.1
growth on oleic acid YNB Glucose +0.7 -0.0 +0.1 N.D. -0.2
auxotrophy Dropout Complete +0.8 +0.1 -0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 -0.1 -0.1 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +1.0 -0.1 +0.0 N.D. -0.3
auxotrophy YNB Glucose +0.4 +0.0 +0.3 N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.7 -0.1 +0.0 N.D. +0.2
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