Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15320 and 15321 are separated by 128 nucleotides15321 and 15322 are separated by 410 nucleotides15322 and 15323 are separated by 652 nucleotides15323 and 15324 are separated by 507 nucleotides mRNA_6952: 15320 - K11858 USP48 ubiquitin carboxyl-terminal hydrolase 48, at 512,124 to 517,290 15320 mRNA_6953: 15321 - K13719 OTU1, YOD1 ubiquitin thioesterase OTU1, at 517,419 to 518,782 15321 mRNA_6954: 15322 - K10591 NEDD4, RSP5 E3 ubiquitin-protein ligase NEDD4, at 519,193 to 522,362 15322 mRNA_6955: 15323 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 523,015 to 527,499 15323 mRNA_6956: 15324 - K00720 UGCG ceramide glucosyltransferase, at 528,007 to 529,680 15324
Group Condition mRNA_6952 mRNA_6953 mRNA_6954 mRNA_6955 mRNA_6956
15320 15321 15322 15323 15324
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.4 N.D. -0.6 -1.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.2 N.D. -1.0 -1.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.2 N.D. -0.7 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -1.2 +0.4 N.D. -0.1 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.6 N.D. -0.7 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 N.D. -0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.0 N.D. -0.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 N.D. -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 N.D. +0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 N.D. +0.0 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 N.D. -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 N.D. -0.2 -0.2
growth on oleic acid YNB Glucose -0.0 +0.1 N.D. -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.2 N.D. +0.1 +0.3
growth on ypd YPD +0.3 -0.1 N.D. -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1 N.D. -0.3 +1.0
auxotrophy Dropout Complete +0.1 -0.3 N.D. -0.1 +0.4
growth on ricinoleic acid YNB Glucose -0.2 +0.1 N.D. +0.0 +0.3
auxotrophy YNB Glucose +0.0 +0.3 N.D. -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 N.D. +0.1 +0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.0 N.D. +0.2 +0.6
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