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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15325 and 15326 are separated by 1350 nucleotides
15326 and 15327 are separated by 309 nucleotides
15327 and 15328 are separated by 546 nucleotides
15328 and 15329 are separated by 162 nucleotides
mRNA_6957: 15325 - K13100 CWC22 pre-mRNA-splicing factor CWC22, at 529,794 to 532,653
15325
mRNA_6958: 15326 - K09238 ACE2 metallothionein expression activator, at 534,004 to 536,795
15326
mRNA_6959: 15327 - K14805 DDX24, MAK5 ATP-dependent RNA helicase DDX24/MAK5, at 537,105 to 540,222
15327
mRNA_6960: 15328 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 540,769 to 543,741
15328
mRNA_6961: 15329 - Hypothetical Protein, at 543,904 to 547,836
15329
Group
Condition
mRNA
_6957
mRNA
_6958
mRNA
_6959
mRNA
_6960
mRNA
_6961
15325
15326
15327
15328
15329
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-2.4
N.D.
-0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-1.7
N.D.
-0.2
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-1.3
N.D.
-0.4
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-1.4
N.D.
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.5
N.D.
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
N.D.
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
N.D.
-0.4
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.3
N.D.
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
N.D.
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
N.D.
+0.0
-0.0
growth on ypd
YPD
N.D.
+0.1
N.D.
+0.0
+0.2
auxotrophy
Dropout Complete
N.D.
+0.2
N.D.
+0.1
+0.0
growth on oleic acid
YNB Glucose
N.D.
+0.6
N.D.
+0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.6
N.D.
-0.0
-0.0
auxotrophy
YNB Glucose
N.D.
+0.5
N.D.
+0.2
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+1.2
N.D.
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+1.0
N.D.
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.8
N.D.
+0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+1.9
N.D.
+0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+1.8
N.D.
+0.3
-0.0
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