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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15328 and 15329 are separated by 162 nucleotides
15329 and 15330 are separated by 49 nucleotides
15330 and 15331 are separated by 382 nucleotides
15331 and 15332 are separated by 945 nucleotides
mRNA_6960: 15328 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 540,769 to 543,741
15328
mRNA_6961: 15329 - Hypothetical Protein, at 543,904 to 547,836
15329
mRNA_6962: 15330 - K03132 TAF7 transcription initiation factor TFIID subunit 7, at 547,886 to 549,459
15330
mRNA_6963: 15331 - Hypothetical Protein, at 549,842 to 550,144
15331
mRNA_6964: 15332 - K18754 LIN28 protein lin-28, at 551,090 to 553,316
15332
Group
Condition
mRNA
_6960
mRNA
_6961
mRNA
_6962
mRNA
_6963
mRNA
_6964
15328
15329
15330
15331
15332
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.0
N.D.
-1.4
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.1
N.D.
-0.7
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
N.D.
-0.8
+0.0
growth on ricinoleic acid
YNB Glucose
-0.2
-0.1
N.D.
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
N.D.
-0.3
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.2
N.D.
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.2
N.D.
+0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.0
N.D.
-0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.0
N.D.
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.0
N.D.
+0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
N.D.
+0.1
+0.1
growth on oleic acid
YNB Glucose
+0.0
-0.1
N.D.
-0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.0
N.D.
+0.5
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.0
N.D.
+0.4
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.0
N.D.
+0.3
+0.1
growth on oleic acid
YNB Oleic Acid
+0.3
-0.1
N.D.
+0.1
+0.1
auxotrophy
Dropout Complete
+0.1
+0.0
N.D.
+0.2
+0.1
auxotrophy
YNB Glucose
+0.2
+0.1
N.D.
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
N.D.
+0.3
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.0
N.D.
+0.3
+0.1
growth on ypd
YPD
+0.0
+0.2
N.D.
+0.8
+0.1
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