Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15329 and 15330 are separated by 49 nucleotides15330 and 15331 are separated by 382 nucleotides15331 and 15332 are separated by 945 nucleotides15332 and 15333 are separated by 560 nucleotides mRNA_6961: 15329 - Hypothetical Protein, at 543,904 to 547,836 15329 mRNA_6962: 15330 - K03132 TAF7 transcription initiation factor TFIID subunit 7, at 547,886 to 549,459 15330 mRNA_6963: 15331 - Hypothetical Protein, at 549,842 to 550,144 15331 mRNA_6964: 15332 - K18754 LIN28 protein lin-28, at 551,090 to 553,316 15332 mRNA_6965: 15333 - Hypothetical Protein, at 553,877 to 555,010 15333
Group Condition mRNA_6961 mRNA_6962 mRNA_6963 mRNA_6964 mRNA_6965
15329 15330 15331 15332 15333
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. -1.4 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.8 +0.0 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.3 -0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.0 -0.2 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.3 -0.3 +0.1
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.1 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.3 -0.1 -0.3
growth on oleic acid YNB Glucose -0.1 N.D. -0.0 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.7 +0.1 +0.4
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.1 +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. -0.3 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. +0.1 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. +0.3 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. +0.3 +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.3 +0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.4 -0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. +0.5 -0.0 +0.2
auxotrophy YNB Glucose +0.1 N.D. +0.1 +0.1 +0.5
auxotrophy Dropout Complete +0.0 N.D. +0.2 +0.1 +0.6
growth on ypd YPD +0.2 N.D. +0.8 +0.1 +0.6
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