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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15331 and 15332 are separated by 945 nucleotides
15332 and 15333 are separated by 560 nucleotides
15333 and 15334 are separated by 359 nucleotides
15334 and 15335 are separated by 251 nucleotides
mRNA_6963: 15331 - Hypothetical Protein, at 549,842 to 550,144
15331
mRNA_6964: 15332 - K18754 LIN28 protein lin-28, at 551,090 to 553,316
15332
mRNA_6965: 15333 - Hypothetical Protein, at 553,877 to 555,010
15333
mRNA_6966: 15334 - K02210 MCM7, CDC47 DNA replication licensing factor MCM7, at 555,370 to 558,100
15334
mRNA_6967: 15335 - K19995 SCAMP secretory carrier-associated membrane protein, at 558,352 to 560,106
15335
Group
Condition
mRNA
_6963
mRNA
_6964
mRNA
_6965
mRNA
_6966
mRNA
_6967
15331
15332
15333
15334
15335
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.4
-0.4
-0.3
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
+0.0
-0.5
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.3
+0.1
N.D.
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.2
-0.6
N.D.
+0.0
growth on oleic acid
YNB Glucose
-0.0
+0.1
-0.2
N.D.
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.0
+0.2
N.D.
-0.5
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
+0.1
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.0
-0.3
N.D.
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
+0.1
+0.4
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
-0.3
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.1
-0.3
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.0
+0.3
N.D.
-0.6
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.1
-0.0
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+0.1
-0.2
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.0
-0.1
N.D.
+0.3
auxotrophy
YNB Glucose
+0.1
+0.1
+0.5
N.D.
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.1
N.D.
+0.5
auxotrophy
Dropout Complete
+0.2
+0.1
+0.6
N.D.
-0.1
growth on ypd
YPD
+0.8
+0.1
+0.6
N.D.
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.1
-0.0
N.D.
+0.7
ypd buoyancy
40 hrs High Buoyancy
+0.5
-0.0
+0.2
N.D.
+0.7
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