Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15331 and 15332 are separated by 945 nucleotides15332 and 15333 are separated by 560 nucleotides15333 and 15334 are separated by 359 nucleotides15334 and 15335 are separated by 251 nucleotides mRNA_6963: 15331 - Hypothetical Protein, at 549,842 to 550,144 15331 mRNA_6964: 15332 - K18754 LIN28 protein lin-28, at 551,090 to 553,316 15332 mRNA_6965: 15333 - Hypothetical Protein, at 553,877 to 555,010 15333 mRNA_6966: 15334 - K02210 MCM7, CDC47 DNA replication licensing factor MCM7, at 555,370 to 558,100 15334 mRNA_6967: 15335 - K19995 SCAMP secretory carrier-associated membrane protein, at 558,352 to 560,106 15335
Group Condition mRNA_6963 mRNA_6964 mRNA_6965 mRNA_6966 mRNA_6967
15331 15332 15333 15334 15335
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.4 -0.3 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.0 -0.5 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3 +0.1 N.D. -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.2 -0.6 N.D. +0.0
growth on oleic acid YNB Glucose -0.0 +0.1 -0.2 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.0 +0.2 N.D. -0.5
growth on ricinoleic acid YNB Glucose -0.1 -0.3 +0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.0 -0.3 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 +0.1 +0.4 N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.1 -0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 -0.3 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.0 +0.3 N.D. -0.6
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.1 -0.0 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 -0.2 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 -0.1 N.D. +0.3
auxotrophy YNB Glucose +0.1 +0.1 +0.5 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.1 N.D. +0.5
auxotrophy Dropout Complete +0.2 +0.1 +0.6 N.D. -0.1
growth on ypd YPD +0.8 +0.1 +0.6 N.D. -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 -0.0 N.D. +0.7
ypd buoyancy 40 hrs High Buoyancy +0.5 -0.0 +0.2 N.D. +0.7
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