Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15337 and 15338 are separated by 2063 nucleotides15338 and 15339 are separated by 374 nucleotides15339 and 15340 are separated by 134 nucleotides15340 and 15341 are separated by 172 nucleotides mRNA_6969: 15337 - K17261 CAP1_2, SRV2 adenylyl cyclase-associated protein, at 561,995 to 564,059 15337 mRNA_6970: 15338 - Hypothetical Protein, at 566,123 to 566,867 15338 mRNA_6971: 15339 - K03671 trxA thioredoxin 1, at 567,242 to 568,041 15339 mRNA_6972: 15340 - K20279 SYNJ synaptojanin, at 568,176 to 572,419 15340 mRNA_6973: 15341 - K11303 HAT1, KAT1 histone acetyltransferase 1, at 572,592 to 574,305 15341
Group Condition mRNA_6969 mRNA_6970 mRNA_6971 mRNA_6972 mRNA_6973
15337 15338 15339 15340 15341
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.3 -0.2 -0.7
growth on oleic acid YNB Glucose N.D. -0.1 -0.4 -0.2 -0.5
growth on ypd YPD N.D. +0.2 -0.4 -0.2 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.6 -0.9 -0.4 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 -0.1 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.2 +0.3 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 +0.6 -0.2 -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 +0.0 +0.0 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.1 -0.5 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.1 -0.4 -0.3
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 +0.3 -0.5 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.2 +0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.7 -0.3 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.7 +0.2 +0.0 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 -0.1 -0.1 +0.6
auxotrophy YNB Glucose N.D. +0.3 +0.0 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 -0.3 +0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.6 -0.0 +0.1
auxotrophy Dropout Complete N.D. +0.5 +0.0 +0.2 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.2 -0.2 +0.9
remove
mRNA_6969
plot
remove
mRNA_6970
plot
remove
mRNA_6971
remove
mRNA_6972
plot
remove
mRNA_6973
plot