Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15339 and 15340 are separated by 134 nucleotides15340 and 15341 are separated by 172 nucleotides15341 and 15342 are separated by 136 nucleotides15342 and 15343 are separated by 656 nucleotides mRNA_6971: 15339 - K03671 trxA thioredoxin 1, at 567,242 to 568,041 15339 mRNA_6972: 15340 - K20279 SYNJ synaptojanin, at 568,176 to 572,419 15340 mRNA_6973: 15341 - K11303 HAT1, KAT1 histone acetyltransferase 1, at 572,592 to 574,305 15341 mRNA_6974: 15342 - K17686 copA, ATP7 Cu+-exporting ATPase, at 574,442 to 577,802 15342 mRNA_6975: 15343 - Hypothetical Protein, at 578,459 to 580,488 15343
Group Condition mRNA_6971 mRNA_6972 mRNA_6973 mRNA_6974 mRNA_6975
15339 15340 15341 15342 15343
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.0 -0.4 N.D. -1.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.2 -0.5 N.D. -1.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.4 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.5 +0.1 N.D. -1.2
growth on ypd YPD -0.4 -0.2 -0.5 N.D. +0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.2 -0.7 N.D. +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 +0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.4 -0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.5 +0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 -0.1 N.D. -0.5
growth on oleic acid YNB Glucose -0.4 -0.2 -0.5 N.D. +0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 +0.6 N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.3 -0.4 N.D. +0.4
growth on ricinoleic acid YNB Glucose +0.1 -0.1 -0.4 N.D. +0.7
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 -0.1 N.D. +0.9
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 +0.9 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 +0.3 N.D. +0.8
auxotrophy Dropout Complete +0.0 +0.2 +0.3 N.D. +0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 -0.4 N.D. +1.6
ypd buoyancy 40 hrs High Buoyancy +0.6 -0.0 +0.1 N.D. +0.7
auxotrophy YNB Glucose +0.0 +0.1 +0.3 N.D. +1.3
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