Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15340 and 15341 are separated by 172 nucleotides15341 and 15342 are separated by 136 nucleotides15342 and 15343 are separated by 656 nucleotides15343 and 15344 are separated by 2129 nucleotides mRNA_6972: 15340 - K20279 SYNJ synaptojanin, at 568,176 to 572,419 15340 mRNA_6973: 15341 - K11303 HAT1, KAT1 histone acetyltransferase 1, at 572,592 to 574,305 15341 mRNA_6974: 15342 - K17686 copA, ATP7 Cu+-exporting ATPase, at 574,442 to 577,802 15342 mRNA_6975: 15343 - Hypothetical Protein, at 578,459 to 580,488 15343 mRNA_6976: 15344 - K14002 SCJ1 DnaJ-related protein SCJ1, at 582,618 to 583,763 15344
Group Condition mRNA_6972 mRNA_6973 mRNA_6974 mRNA_6975 mRNA_6976
15340 15341 15342 15343 15344
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.5 N.D. -1.8 -0.7
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.4 N.D. -1.7 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.1 N.D. -1.2 +0.5
growth on oleic acid YNB Oleic Acid -0.2 -0.7 N.D. +0.4 -0.4
growth on ypd YPD -0.2 -0.5 N.D. +0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.0 N.D. -0.2 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 N.D. -0.5 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.1 N.D. -0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.4 N.D. +0.4 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.3 N.D. +0.1 +0.6
growth on oleic acid YNB Glucose -0.2 -0.5 N.D. +0.9 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.4 N.D. +0.7 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.1 N.D. +0.2 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.6 N.D. -0.3 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 N.D. +0.7 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.9 N.D. -0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 N.D. +0.9 +0.4
auxotrophy Dropout Complete +0.2 +0.3 N.D. +0.9 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.3 N.D. +0.8 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.4 N.D. +1.6 +0.7
auxotrophy YNB Glucose +0.1 +0.3 N.D. +1.3 +0.5
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