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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15341 and 15342 are separated by 136 nucleotides
15342 and 15343 are separated by 656 nucleotides
15343 and 15344 are separated by 2129 nucleotides
15344 and 15345 are separated by 26 nucleotides
mRNA_6973: 15341 - K11303 HAT1, KAT1 histone acetyltransferase 1, at 572,592 to 574,305
15341
mRNA_6974: 15342 - K17686 copA, ATP7 Cu+-exporting ATPase, at 574,442 to 577,802
15342
mRNA_6975: 15343 - Hypothetical Protein, at 578,459 to 580,488
15343
mRNA_6976: 15344 - K14002 SCJ1 DnaJ-related protein SCJ1, at 582,618 to 583,763
15344
mRNA_6977: 15345 - K09515 DNAJB9 DnaJ homolog subfamily B member 9, at 583,790 to 584,346
15345
Group
Condition
mRNA
_6973
mRNA
_6974
mRNA
_6975
mRNA
_6976
mRNA
_6977
15341
15342
15343
15344
15345
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
N.D.
-1.8
-0.7
+0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.4
N.D.
-1.7
+0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
N.D.
-0.2
-0.5
-0.6
growth on oleic acid
YNB Oleic Acid
-0.7
N.D.
+0.4
-0.4
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
-0.5
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
-1.2
+0.5
+0.2
growth on ypd
YPD
-0.5
N.D.
+0.1
-0.4
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
N.D.
+0.4
-0.4
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
N.D.
-0.2
+0.3
+0.2
growth on oleic acid
YNB Glucose
-0.5
N.D.
+0.9
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
-0.4
N.D.
+0.7
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
N.D.
+0.1
+0.6
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
+0.7
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
+0.9
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
+0.2
+0.5
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.9
N.D.
-0.0
+0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
N.D.
-0.3
+0.4
+0.6
auxotrophy
Dropout Complete
+0.3
N.D.
+0.9
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
+0.8
+0.6
+0.0
auxotrophy
YNB Glucose
+0.3
N.D.
+1.3
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
N.D.
+1.6
+0.7
+0.7
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