Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15342 and 15343 are separated by 656 nucleotides15343 and 15344 are separated by 2129 nucleotides15344 and 15345 are separated by 26 nucleotides15345 and 15346 are separated by 142 nucleotides mRNA_6974: 15342 - K17686 copA, ATP7 Cu+-exporting ATPase, at 574,442 to 577,802 15342 mRNA_6975: 15343 - Hypothetical Protein, at 578,459 to 580,488 15343 mRNA_6976: 15344 - K14002 SCJ1 DnaJ-related protein SCJ1, at 582,618 to 583,763 15344 mRNA_6977: 15345 - K09515 DNAJB9 DnaJ homolog subfamily B member 9, at 583,790 to 584,346 15345 mRNA_6978: 15346 - KOG1014 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3, at 584,489 to 585,687 15346
Group Condition mRNA_6974 mRNA_6975 mRNA_6976 mRNA_6977 mRNA_6978
15342 15343 15344 15345 15346
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.8 -0.7 +0.7 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -1.7 +0.2 -0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 -0.5 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -1.2 +0.5 +0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.5 -0.0 -0.0 -0.0
growth on oleic acid YNB Oleic Acid N.D. +0.4 -0.4 -0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 +0.3 +0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.3 -0.2 +0.1
growth on ypd YPD N.D. +0.1 -0.4 +0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.7 +0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.6 +0.3 -0.2
growth on oleic acid YNB Glucose N.D. +0.9 -0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 +0.5 +0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.4 -0.4 +0.5 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.9 +0.4 -0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 +0.4 +0.6 +0.4
auxotrophy Dropout Complete N.D. +0.9 +0.3 +0.1 -0.0
growth on ricinoleic acid YNB Glucose N.D. +0.7 -0.1 +0.4 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.8 +0.6 +0.0 -0.0
auxotrophy YNB Glucose N.D. +1.3 +0.5 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +1.6 +0.7 +0.7 +0.0
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