Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15343 and 15344 are separated by 2129 nucleotides15344 and 15345 are separated by 26 nucleotides15345 and 15346 are separated by 142 nucleotides15346 and 15347 are separated by 576 nucleotides mRNA_6975: 15343 - Hypothetical Protein, at 578,459 to 580,488 15343 mRNA_6976: 15344 - K14002 SCJ1 DnaJ-related protein SCJ1, at 582,618 to 583,763 15344 mRNA_6977: 15345 - K09515 DNAJB9 DnaJ homolog subfamily B member 9, at 583,790 to 584,346 15345 mRNA_6978: 15346 - KOG1014 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3, at 584,489 to 585,687 15346 mRNA_6979: 15347 - KOG2789 Putative Zn-finger protein, at 586,264 to 588,274 15347
Group Condition mRNA_6975 mRNA_6976 mRNA_6977 mRNA_6978 mRNA_6979
15343 15344 15345 15346 15347
growth on ricinoleic acid YNB Ricinoleic Acid -1.8 -0.7 +0.7 -0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy -1.7 +0.2 -0.1 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 -0.6 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.2 +0.5 +0.2 -0.2 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.4 +0.6 +0.4 -2.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.3 +0.2 -0.2 -0.9
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.0 -0.0 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.3 -0.2 +0.1 -0.4
growth on oleic acid YNB Oleic Acid +0.4 -0.4 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.7 +0.1 -0.0 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.5 +0.3 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.6 +0.3 -0.2 -0.2
growth on ypd YPD +0.1 -0.4 +0.4 +0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.4 +0.5 +0.4 +0.0
growth on oleic acid YNB Glucose +0.9 -0.1 +0.1 -0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.9 +0.4 -0.2 -0.0 +0.2
growth on ricinoleic acid YNB Glucose +0.7 -0.1 +0.4 +0.2 +0.0
auxotrophy Dropout Complete +0.9 +0.3 +0.1 -0.0 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.8 +0.6 +0.0 -0.0 +0.2
auxotrophy YNB Glucose +1.3 +0.5 -0.1 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.6 +0.7 +0.7 +0.0 +0.5
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