Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15345 and 15346 are separated by 142 nucleotides15346 and 15347 are separated by 576 nucleotides15347 and 15348 are separated by 356 nucleotides15348 and 15349 are separated by 294 nucleotides mRNA_6977: 15345 - K09515 DNAJB9 DnaJ homolog subfamily B member 9, at 583,790 to 584,346 15345 mRNA_6978: 15346 - KOG1014 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3, at 584,489 to 585,687 15346 mRNA_6979: 15347 - KOG2789 Putative Zn-finger protein, at 586,264 to 588,274 15347 mRNA_6980: 15348 - SUPERFAMILY--SSF51445, at 588,631 to 590,610 15348 mRNA_6981: 15349 - KOG0613 Projectin/twitchin and related proteins, at 590,905 to 593,177 15349
Group Condition mRNA_6977 mRNA_6978 mRNA_6979 mRNA_6980 mRNA_6981
15345 15346 15347 15348 15349
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.1 -0.2 -0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 -0.9 +0.0 -0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.1 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.2 -0.6 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -0.1 -0.5 -0.5 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.1 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.2 -0.2 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.1 -0.4 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.4 -2.0 +0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0 +0.2 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 -0.2 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 -0.4 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 +0.1 +0.0 -0.0
growth on oleic acid YNB Glucose +0.1 -0.1 +0.3 +0.0 -0.2
auxotrophy Dropout Complete +0.1 -0.0 +0.3 +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 +0.2 +0.3 -0.1
auxotrophy YNB Glucose -0.1 +0.2 +0.3 +0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.4 +0.0 +0.0 -0.2
growth on ricinoleic acid YNB Glucose +0.4 +0.2 +0.0 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.0 +0.5 -0.1 +0.0
growth on ypd YPD +0.4 +0.2 +0.4 +0.3 +0.4
remove
mRNA_6977
plot
remove
mRNA_6978
plot
remove
mRNA_6979
remove
mRNA_6980
plot
remove
mRNA_6981
plot