Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15348 and 15349 are separated by 294 nucleotides15349 and 15350 are separated by 527 nucleotides15350 and 15351 are separated by 399 nucleotides15351 and 15352 are separated by 226 nucleotides mRNA_6980: 15348 - SUPERFAMILY--SSF51445, at 588,631 to 590,610 15348 mRNA_6981: 15349 - KOG0613 Projectin/twitchin and related proteins, at 590,905 to 593,177 15349 mRNA_6982: 15350 - K11497 CENPC centromere protein C, at 593,705 to 596,436 15350 mRNA_6983: 15351 - K02145 ATPeV1A, ATP6A V-type H+-transporting ATPase subunit A, at 596,836 to 599,468 15351 mRNA_6984: 15352 - HMMPfam-Fungal specific transcription factor domain-PF04082, at 599,695 to 602,665 15352
Group Condition mRNA_6980 mRNA_6981 mRNA_6982 mRNA_6983 mRNA_6984
15348 15349 15350 15351 15352
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 N.D. N.D. -0.9
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.3 N.D. N.D. -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.2 N.D. N.D. -0.9
growth on oleic acid YNB Oleic Acid -0.4 -0.2 N.D. N.D. -0.4
growth on oleic acid YNB Glucose +0.0 -0.2 N.D. N.D. -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.0 N.D. N.D. -0.8
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.2 N.D. N.D. -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 N.D. N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.4 -0.3 N.D. N.D. -0.6
auxotrophy Dropout Complete +0.0 -0.0 N.D. N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 N.D. N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.1 N.D. N.D. -0.7
auxotrophy YNB Glucose +0.3 -0.1 N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 N.D. N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 N.D. N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.0 N.D. N.D. +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.2 N.D. N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.5 N.D. N.D. +0.1
growth on ypd YPD +0.3 +0.4 N.D. N.D. -0.1
remove
mRNA_6980
plot		 remove
mRNA_6981
plot		 remove
mRNA_6982		 remove
mRNA_6983
plot		 remove
mRNA_6984
plot