Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15349 and 15350 are separated by 527 nucleotides15350 and 15351 are separated by 399 nucleotides15351 and 15352 are separated by 226 nucleotides15352 and 15353 are separated by 199 nucleotides mRNA_6981: 15349 - KOG0613 Projectin/twitchin and related proteins, at 590,905 to 593,177 15349 mRNA_6982: 15350 - K11497 CENPC centromere protein C, at 593,705 to 596,436 15350 mRNA_6983: 15351 - K02145 ATPeV1A, ATP6A V-type H+-transporting ATPase subunit A, at 596,836 to 599,468 15351 mRNA_6984: 15352 - HMMPfam-Fungal specific transcription factor domain-PF04082, at 599,695 to 602,665 15352 mRNA_6985: 15353 - BLAST chitin deacetylase [Moniliophthora roreri MCA 2997], at 602,865 to 604,394 15353
Group Condition mRNA_6981 mRNA_6982 mRNA_6983 mRNA_6984 mRNA_6985
15349 15350 15351 15352 15353
growth on oleic acid YNB Glucose -0.2 N.D. N.D. -0.8 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. N.D. -0.9 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. N.D. -0.9 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. N.D. -0.8 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. N.D. -0.5 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. N.D. -0.5 -0.1
growth on ricinoleic acid YNB Glucose -0.3 N.D. N.D. -0.6 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. N.D. -0.7 +0.2
growth on oleic acid YNB Oleic Acid -0.2 N.D. N.D. -0.4 +0.1
auxotrophy Dropout Complete -0.0 N.D. N.D. -0.5 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. N.D. -0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. N.D. +0.0 -0.1
auxotrophy YNB Glucose -0.1 N.D. N.D. -0.6 +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. N.D. -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. N.D. +0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. N.D. +0.0 +0.0
growth on ypd YPD +0.4 N.D. N.D. -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. N.D. +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. N.D. +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. N.D. +0.6 +0.1
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