Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15352 and 15353 are separated by 199 nucleotides15353 and 15354 are separated by 139 nucleotides15354 and 15355 are separated by 564 nucleotides15355 and 15356 are separated by 334 nucleotides mRNA_6984: 15352 - HMMPfam-Fungal specific transcription factor domain-PF04082, at 599,695 to 602,665 15352 mRNA_6985: 15353 - BLAST chitin deacetylase [Moniliophthora roreri MCA 2997], at 602,865 to 604,394 15353 mRNA_6986: 15354 - K12872 RBM22, SLT11 pre-mRNA-splicing factor RBM22/SLT11, at 604,534 to 605,830 15354 mRNA_6987: 15355 - BLAST plasma membrane protein [Pseudozyma hubeiensis SY62], at 606,395 to 609,554 15355 mRNA_6988: 15356 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 609,889 to 611,754 15356
Group Condition mRNA_6984 mRNA_6985 mRNA_6986 mRNA_6987 mRNA_6988
15352 15353 15354 15355 15356
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 +0.2 N.D. +0.0 -0.7
growth on oleic acid YNB Glucose -0.8 -0.1 N.D. -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.9 +0.1 N.D. -0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.4 +0.1 N.D. -0.2 -0.7
growth on ricinoleic acid YNB Glucose -0.6 +0.2 N.D. +0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.1 N.D. +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 N.D. -0.1 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 N.D. +0.0 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.1 N.D. +0.2 -0.1
auxotrophy Dropout Complete -0.5 +0.1 N.D. -0.4 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.7 +0.2 N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 -0.2 N.D. +0.5 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 N.D. +0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.0 N.D. -0.1 -0.1
auxotrophy YNB Glucose -0.6 +0.5 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 N.D. +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 N.D. -0.3 +0.2
growth on ypd YPD -0.1 -0.0 N.D. -0.1 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.2 N.D. +0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.0 N.D. +0.6 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.1 N.D. -0.0 +0.1
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