Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15353 and 15354 are separated by 139 nucleotides15354 and 15355 are separated by 564 nucleotides15355 and 15356 are separated by 334 nucleotides15356 and 15357 are separated by 70 nucleotides mRNA_6985: 15353 - BLAST chitin deacetylase [Moniliophthora roreri MCA 2997], at 602,865 to 604,394 15353 mRNA_6986: 15354 - K12872 RBM22, SLT11 pre-mRNA-splicing factor RBM22/SLT11, at 604,534 to 605,830 15354 mRNA_6987: 15355 - BLAST plasma membrane protein [Pseudozyma hubeiensis SY62], at 606,395 to 609,554 15355 mRNA_6988: 15356 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 609,889 to 611,754 15356 mRNA_6989: 15357 - K11836 USP5_13, UBP14 ubiquitin carboxyl-terminal hydrolase 5/13, at 611,825 to 615,054 15357
Group Condition mRNA_6985 mRNA_6986 mRNA_6987 mRNA_6988 mRNA_6989
15353 15354 15355 15356 15357
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.0 +0.1 -3.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. -0.1 -0.1 -2.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.1 -0.6 -1.9
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.3 +0.2 -2.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.5 +0.1 -2.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +0.0 -0.7 -1.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.2 -0.7 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.2 -0.1 -1.2
growth on ricinoleic acid YNB Glucose +0.2 N.D. +0.1 -0.5 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.5 -0.0 -1.2
growth on oleic acid YNB Glucose -0.1 N.D. -0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.4 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.0 -0.5 +0.1
auxotrophy Dropout Complete +0.1 N.D. -0.4 +0.3 -0.2
growth on ypd YPD -0.0 N.D. -0.1 +0.5 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. +0.1 -0.4 +0.6
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -0.1 +0.2 +0.1
auxotrophy YNB Glucose +0.5 N.D. -0.1 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. +0.0 -0.2 +1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.6 +0.1 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. +0.2 -0.1 +1.9
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