Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15354 and 15355 are separated by 564 nucleotides15355 and 15356 are separated by 334 nucleotides15356 and 15357 are separated by 70 nucleotides15357 and 15358 are separated by 508 nucleotides mRNA_6986: 15354 - K12872 RBM22, SLT11 pre-mRNA-splicing factor RBM22/SLT11, at 604,534 to 605,830 15354 mRNA_6987: 15355 - BLAST plasma membrane protein [Pseudozyma hubeiensis SY62], at 606,395 to 609,554 15355 mRNA_6988: 15356 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 609,889 to 611,754 15356 mRNA_6989: 15357 - K11836 USP5_13, UBP14 ubiquitin carboxyl-terminal hydrolase 5/13, at 611,825 to 615,054 15357 mRNA_6990: 15358 - K09001 anmK anhydro-N-acetylmuramic acid kinase, at 615,563 to 617,347 15358
Group Condition mRNA_6986 mRNA_6987 mRNA_6988 mRNA_6989 mRNA_6990
15354 15355 15356 15357 15358
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.5 +0.1 -2.8 -1.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.6 -1.9 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 -0.1 -2.5 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 +0.1 -3.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 +0.2 -2.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.7 -1.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 -0.0 -1.2 -0.7
growth on oleic acid YNB Oleic Acid N.D. -0.2 -0.7 -0.6 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.5 -0.8 +0.2
growth on oleic acid YNB Glucose N.D. -0.3 -0.1 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 -0.5 +0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 -0.1 -1.2 +0.8
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 -0.1 +0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.4 +0.6 -0.2
growth on ypd YPD N.D. -0.1 +0.5 -0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.0 -0.2 +1.0 -0.5
auxotrophy Dropout Complete N.D. -0.4 +0.3 -0.2 +0.7
auxotrophy YNB Glucose N.D. -0.1 +0.1 -0.1 +0.6
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.2 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.6 +0.1 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.1 +1.9 +0.8
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