Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15361 and 15362 are separated by 126 nucleotides15362 and 15363 are separated by 230 nucleotides15363 and 15364 are separated by 126 nucleotides15364 and 15365 are separated by 64 nucleotides mRNA_6993: 15361 - HMMPfam-Protein of unknown function (DUF455)-PF04305,ProSiteProfiles-Rieske [2Fe-2S] iron-sulfur domain profile.-PS51296,SUPERFAMILY--SSF47240,SUPERFAMILY--SSF50022, at 622,654 to 624,401 15361 mRNA_6994: 15362 - K10134 EI24 etoposide-induced 2.4 mRNA, at 624,528 to 626,391 15362 mRNA_6995: 15363 - K15323 TSEN34 tRNA-splicing endonuclease subunit Sen34, at 626,622 to 627,882 15363 mRNA_6996: 15364 - Hypothetical Protein, at 628,009 to 630,189 15364 mRNA_6997: 15365 - K17053 ABP140 tRNAThr (cytosine32-N3)-methyltransferase, at 630,254 to 632,002 15365
Group Condition mRNA_6993 mRNA_6994 mRNA_6995 mRNA_6996 mRNA_6997
15361 15362 15363 15364 15365
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.6 N.D. -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.0 N.D. +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.6 N.D. +0.0 -1.0
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.5 N.D. -0.0 +0.1
growth on oleic acid YNB Oleic Acid -0.5 +0.1 N.D. +0.1 -0.1
auxotrophy Dropout Complete -0.8 +0.1 N.D. +0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.8 +0.0 N.D. +0.2 +0.3
growth on ypd YPD -0.3 -0.1 N.D. +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 N.D. -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.2 N.D. +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 N.D. -0.1 +0.2
growth on ricinoleic acid YNB Glucose -0.2 +0.0 N.D. +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.1 N.D. +0.2 +0.0
auxotrophy YNB Glucose -0.5 +0.3 N.D. +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.1 N.D. +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.6 N.D. +0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.4 N.D. -0.0 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.3 N.D. +0.2 +0.3
growth on oleic acid YNB Glucose -0.1 +0.2 N.D. -0.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.6 N.D. +0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.1 N.D. +0.4 +0.2
remove
mRNA_6993
plot
remove
mRNA_6994
plot
remove
mRNA_6995
remove
mRNA_6996
plot
remove
mRNA_6997
plot