Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15363 and 15364 are separated by 126 nucleotides
15364 and 15365 are separated by 64 nucleotides
15365 and 15366 are separated by 238 nucleotides
15366 and 15367 are separated by 339 nucleotides
mRNA_6995: 15363 - K15323 TSEN34 tRNA-splicing endonuclease subunit Sen34, at 626,622 to 627,882
15363
mRNA_6996: 15364 - Hypothetical Protein, at 628,009 to 630,189
15364
mRNA_6997: 15365 - K17053 ABP140 tRNAThr (cytosine32-N3)-methyltransferase, at 630,254 to 632,002
15365
mRNA_6998: 15366 - K00288 MTHFD methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase, at 632,241 to 635,924
15366
mRNA_6999: 15367 - HMMPfam-CUE domain-PF02845,ProSiteProfiles-CUE domain profile.-PS51140,SMART-Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs)-SM00546,SUPERFAMILY--SSF46934, at 636,264 to 637,761
15367
Group
Condition
mRNA
_6995
mRNA
_6996
mRNA
_6997
mRNA
_6998
mRNA
_6999
15363
15364
15365
15366
15367
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
-1.0
-0.7
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.1
-0.4
-0.6
growth on oleic acid
YNB Glucose
N.D.
-0.0
+0.2
-1.4
+0.0
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.2
-1.3
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.0
+0.5
-1.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
+0.3
-1.4
+0.4
auxotrophy
YNB Glucose
N.D.
+0.1
+0.1
-1.3
+0.7
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.0
-0.7
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.2
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.1
-1.1
+0.5
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
-0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
-0.2
-0.1
+0.0
growth on ypd
YPD
N.D.
+0.1
+0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
-0.0
-0.3
+0.1
auxotrophy
Dropout Complete
N.D.
+0.0
+0.3
-0.6
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
+0.1
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
+0.2
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
+0.1
+0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.4
+0.2
-0.5
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
+0.3
-0.8
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.2
+0.3
-0.6
+0.6
remove
mRNA_6995
plot
remove
mRNA_6996
plot
remove
mRNA_6997
remove
mRNA_6998
plot
remove
mRNA_6999
plot