Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15367 and 15368 are separated by 604 nucleotides15368 and 15369 are separated by 124 nucleotides15369 and 15370 are separated by 198 nucleotides15370 and 15371 are separated by 1428 nucleotides mRNA_6999: 15367 - HMMPfam-CUE domain-PF02845,ProSiteProfiles-CUE domain profile.-PS51140,SMART-Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs)-SM00546,SUPERFAMILY--SSF46934, at 636,264 to 637,761 15367 mRNA_7000: 15368 - K06653 PHO81 CDK inhibitor PHO81, at 638,366 to 642,076 15368 mRNA_7001: 15369 - KOG0566 Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family, at 642,201 to 644,311 15369 mRNA_7002: 15370 - Hypothetical Protein, at 644,510 to 646,069 15370 mRNA_7003: 15371 - KOG2394 WD40 protein DMR-N9, at 647,498 to 649,944 15371
Group Condition mRNA_6999 mRNA_7000 mRNA_7001 mRNA_7002 mRNA_7003
15367 15368 15369 15370 15371
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.6 -0.0 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 +0.2 -0.2 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.4 +0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 -0.6 -0.0 -0.4
growth on ricinoleic acid YNB Glucose +0.4 +0.3 -0.3 -0.1 -0.6
growth on ypd YPD -0.1 +0.2 +0.0 +0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.4 +0.0 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.3 -0.3 -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.5 +0.0 -0.1 -0.7
auxotrophy Dropout Complete +0.3 +0.7 -0.4 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.5 -0.1 +0.2 -0.6
growth on oleic acid YNB Oleic Acid -0.2 +0.6 -0.0 -0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.4 +0.1 +0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.1 -0.1 -0.3 +0.1
growth on oleic acid YNB Glucose +0.0 +0.5 -0.0 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.2 -0.4 +0.3 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.5 -0.2 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 +0.0 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.6 -0.1 +0.1 -0.3
auxotrophy YNB Glucose +0.7 +0.8 +0.2 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.6 -0.1 +0.2 +1.1
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