Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15369 and 15370 are separated by 198 nucleotides15370 and 15371 are separated by 1428 nucleotides15371 and 15372 are separated by 132 nucleotides15372 and 15373 are separated by 211 nucleotides mRNA_7001: 15369 - KOG0566 Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family, at 642,201 to 644,311 15369 mRNA_7002: 15370 - Hypothetical Protein, at 644,510 to 646,069 15370 mRNA_7003: 15371 - KOG2394 WD40 protein DMR-N9, at 647,498 to 649,944 15371 mRNA_7004: 15372 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,ProSitePatterns-Glycosyl hydrolases family 5 signature.-PS00659,SUPERFAMILY--SSF51445, at 650,077 to 652,863 15372 mRNA_7005: 15373 - SUPERFAMILY--SSF81383, at 653,075 to 653,981 15373
Group Condition mRNA_7001 mRNA_7002 mRNA_7003 mRNA_7004 mRNA_7005
15369 15370 15371 15372 15373
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.1 -0.7 -0.6 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.0 -0.4 -0.7 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.2 +0.1 -2.1 +0.2
auxotrophy Dropout Complete -0.4 -0.1 -0.4 -0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 -0.5 -1.3 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -0.3 -0.3 -0.4
growth on oleic acid YNB Oleic Acid -0.0 -0.0 -0.2 -0.7 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.2 -0.8 +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 -0.3 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 -0.6 -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.1 -0.6 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.3 +0.0 -0.3
growth on ypd YPD +0.0 +0.0 -0.4 -0.1 -0.2
auxotrophy YNB Glucose +0.2 +0.1 -0.2 -0.4 -0.1
growth on oleic acid YNB Glucose -0.0 -0.0 -0.1 -0.4 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.1 +0.2 +0.1 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.4 +0.2 -0.0 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.3 +0.1 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.3 +0.6 -0.6 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 +0.3 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 +1.1 +0.4 -0.0
remove
mRNA_7001
plot
remove
mRNA_7002
plot
remove
mRNA_7003
remove
mRNA_7004
plot
remove
mRNA_7005
plot