Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15371 and 15372 are separated by 132 nucleotides15372 and 15373 are separated by 211 nucleotides15373 and 15374 are separated by 268 nucleotides15374 and 15375 are separated by 741 nucleotides mRNA_7003: 15371 - KOG2394 WD40 protein DMR-N9, at 647,498 to 649,944 15371 mRNA_7004: 15372 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,ProSitePatterns-Glycosyl hydrolases family 5 signature.-PS00659,SUPERFAMILY--SSF51445, at 650,077 to 652,863 15372 mRNA_7005: 15373 - SUPERFAMILY--SSF81383, at 653,075 to 653,981 15373 mRNA_7006: 15374 - K17974 JSN1, PUF1 protein JSN1, at 654,250 to 659,147 15374 mRNA_7007: 15375 - BLAST mitochondrial complex I protein Fmp36 [Aschersonia al..., at 659,889 to 660,691 15375
Group Condition mRNA_7003 mRNA_7004 mRNA_7005 mRNA_7006 mRNA_7007
15371 15372 15373 15374 15375
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 +0.4 -0.4 -2.1
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -1.3 +0.3 +0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -2.1 +0.2 +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.6 -0.3 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.0 +0.3 -0.2 -1.9
growth on ricinoleic acid YNB Glucose -0.6 +0.2 +0.1 -0.4 -0.8
growth on oleic acid YNB Oleic Acid -0.2 -0.7 -0.0 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.3 -0.4 -0.3 -0.1
auxotrophy YNB Glucose -0.2 -0.4 -0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.2 -0.1 -0.6 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 -0.1 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.7 -0.1 -0.3 +0.4
auxotrophy Dropout Complete -0.4 -0.2 -0.5 -0.3 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.8 +0.2 -0.2 -0.1 +0.1
growth on oleic acid YNB Glucose -0.1 -0.4 +0.0 -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.1 -0.7 +0.3 -0.7
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.0 -0.3 -0.0 -0.1
growth on ypd YPD -0.4 -0.1 -0.2 -0.3 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.2 -0.1 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.6 -0.0 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +1.1 +0.4 -0.0 +0.2 -0.3
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