Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15373 and 15374 are separated by 268 nucleotides
15374 and 15375 are separated by 741 nucleotides
15375 and 15376 are separated by 369 nucleotides
15376 and 15377 are separated by 168 nucleotides
mRNA_7005: 15373 - SUPERFAMILY--SSF81383, at 653,075 to 653,981
15373
mRNA_7006: 15374 - K17974 JSN1, PUF1 protein JSN1, at 654,250 to 659,147
15374
mRNA_7007: 15375 - BLAST mitochondrial complex I protein Fmp36 [Aschersonia al..., at 659,889 to 660,691
15375
mRNA_7008: 15376 - Hypothetical Protein, at 661,061 to 661,645
15376
mRNA_7009: 15377 - Hypothetical Protein, at 661,814 to 663,427
15377
Group
Condition
mRNA
_7005
mRNA
_7006
mRNA
_7007
mRNA
_7008
mRNA
_7009
15373
15374
15375
15376
15377
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.2
-1.9
-0.8
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.4
-2.1
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.3
-0.7
-0.5
-0.6
growth on ricinoleic acid
YNB Glucose
+0.1
-0.4
-0.8
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
-0.3
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.0
-0.1
-0.0
+0.0
growth on oleic acid
YNB Oleic Acid
-0.0
-0.2
-0.4
+0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.2
-0.2
-0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
+0.1
-0.0
+0.0
growth on ypd
YPD
-0.2
-0.3
+0.7
-0.6
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.1
-0.4
+0.5
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.2
-0.3
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.6
+0.2
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.4
+0.2
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.3
-0.1
+0.3
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
+0.4
+0.1
-0.0
growth on oleic acid
YNB Glucose
+0.0
-0.3
-0.1
+0.4
+0.0
auxotrophy
Dropout Complete
-0.5
-0.3
+0.4
+0.4
+0.1
auxotrophy
YNB Glucose
-0.1
-0.1
-0.3
+0.4
+0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.1
+0.1
+0.3
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.2
-0.0
+0.4
+0.0
remove
mRNA_7005
plot
remove
mRNA_7006
plot
remove
mRNA_7007
remove
mRNA_7008
plot
remove
mRNA_7009
plot