Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15376 and 15377 are separated by 168 nucleotides15377 and 15378 are separated by 470 nucleotides15378 and 15379 are separated by 264 nucleotides15379 and 15380 are separated by 301 nucleotides mRNA_7008: 15376 - Hypothetical Protein, at 661,061 to 661,645 15376 mRNA_7009: 15377 - Hypothetical Protein, at 661,814 to 663,427 15377 mRNA_7010: 15378 - Hypothetical Protein, at 663,898 to 666,099 15378 mRNA_7011: 15379 - Hypothetical Protein, at 666,364 to 668,286 15379 mRNA_7012: 15380 - KOG4364 Chromatin assembly factor-I, at 668,588 to 672,215 15380
Group Condition mRNA_7008 mRNA_7009 mRNA_7010 mRNA_7011 mRNA_7012
15376 15377 15378 15379 15380
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.6 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.0 N.D. +0.1 N.D.
growth on ypd YPD -0.6 +0.2 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.2 -0.2 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 N.D. -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.0 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.0 N.D. +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 N.D. +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 N.D. +0.8 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.0 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.0 N.D. +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.2 N.D. +0.6 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 N.D. +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 N.D. +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.6 N.D. +0.9 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.4 N.D. -0.0 N.D.
auxotrophy Dropout Complete +0.4 +0.1 N.D. +0.2 N.D.
growth on oleic acid YNB Glucose +0.4 +0.0 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.5 N.D. +0.2 N.D.
auxotrophy YNB Glucose +0.4 +0.6 N.D. +0.3 N.D.
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