Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15380 and 15381 are separated by 425 nucleotides
15381 and 15382 are separated by 2103 nucleotides
15382 and 15383 are separated by 1470 nucleotides
15383 and 15384 are separated by 153 nucleotides
mRNA_7012: 15380 - KOG4364 Chromatin assembly factor-I, at 668,588 to 672,215
15380
mRNA_7013: 15381 - K10755 RFC2_4 replication factor C subunit 2/4, at 672,641 to 674,296
15381
mRNA_7014: 15382 - KOG1721 FOG Zn-finger, at 676,400 to 676,740
15382
mRNA_7015: 15383 - KOG2913 Predicted membrane protein, at 678,211 to 680,397
15383
mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680,551 to 683,526
15384
Group
Condition
mRNA
_7012
mRNA
_7013
mRNA
_7014
mRNA
_7015
mRNA
_7016
15380
15381
15382
15383
15384
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
-0.2
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
+0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
-0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
+0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
+0.2
+0.1
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
+0.3
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
+0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.3
+0.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
+0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
+0.4
+0.1
growth on ypd
YPD
N.D.
N.D.
N.D.
+0.3
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
+0.1
+0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.4
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
+0.3
+0.2
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
+0.2
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
+0.6
-0.0
remove
mRNA_7012
plot
remove
mRNA_7013
plot
remove
mRNA_7014
remove
mRNA_7015
plot
remove
mRNA_7016
plot