Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15382 and 15383 are separated by 1470 nucleotides
15383 and 15384 are separated by 153 nucleotides
15384 and 15385 are separated by 113 nucleotides
15385 and 15386 are separated by 583 nucleotides
mRNA_7014: 15382 - KOG1721 FOG Zn-finger, at 676,400 to 676,740
15382
mRNA_7015: 15383 - KOG2913 Predicted membrane protein, at 678,211 to 680,397
15383
mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680,551 to 683,526
15384
mRNA_7017: 15385 - K03574 mutT, NUDT15, MTH2 8-oxo-dGTP diphosphatase, at 683,640 to 684,233
15385
mRNA_7018: 15386 - Hypothetical Protein, at 684,817 to 685,871
15386
Group
Condition
mRNA
_7014
mRNA
_7015
mRNA
_7016
mRNA
_7017
mRNA
_7018
15382
15383
15384
15385
15386
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.4
-2.4
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.4
-0.2
-1.6
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.5
-0.2
-0.5
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
-0.3
-1.0
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
-0.2
-0.5
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
+0.1
-0.6
-0.0
growth on ypd
YPD
N.D.
+0.3
+0.2
-0.9
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.3
+0.1
-0.6
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.0
+0.2
-0.5
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
+0.1
+0.0
-0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
+0.1
-0.1
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.1
-0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.6
-0.0
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.4
+0.1
-0.1
+0.2
auxotrophy
Dropout Complete
N.D.
+0.3
+0.1
+0.5
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.3
-0.0
+0.3
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
+0.1
+0.0
+0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
+0.2
+0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.4
+0.1
+0.5
+0.2
growth on oleic acid
YNB Glucose
N.D.
+0.3
+0.1
+0.6
+0.3
auxotrophy
YNB Glucose
N.D.
+0.2
+0.3
+0.8
+0.2
remove
mRNA_7014
plot
remove
mRNA_7015
plot
remove
mRNA_7016
remove
mRNA_7017
plot
remove
mRNA_7018
plot