Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15383 and 15384 are separated by 153 nucleotides15384 and 15385 are separated by 113 nucleotides15385 and 15386 are separated by 583 nucleotides15386 and 15387 are separated by 216 nucleotides mRNA_7015: 15383 - KOG2913 Predicted membrane protein, at 678,211 to 680,397 15383 mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680,551 to 683,526 15384 mRNA_7017: 15385 - K03574 mutT, NUDT15, MTH2 8-oxo-dGTP diphosphatase, at 683,640 to 684,233 15385 mRNA_7018: 15386 - Hypothetical Protein, at 684,817 to 685,871 15386 mRNA_7019: 15387 - K13212 LUC7L2 RNA-binding protein Luc7-like 2, at 686,088 to 688,034 15387
Group Condition mRNA_7015 mRNA_7016 mRNA_7017 mRNA_7018 mRNA_7019
15383 15384 15385 15386 15387
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.4 -2.4 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 -1.6 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.3 -1.0 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.2 -0.5 -0.5 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 -0.5 -0.3 +0.2
growth on ypd YPD +0.3 +0.2 -0.9 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.0 -0.2 +0.2 -0.8
growth on ricinoleic acid YNB Glucose +0.0 +0.1 -0.6 -0.0 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 -0.6 +0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 +0.0 +0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 -0.1 +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.1 -0.1 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.1 -0.1 +0.3 +0.1
auxotrophy Dropout Complete +0.3 +0.1 +0.5 -0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.2 -0.5 +0.5 +0.9
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.1 +0.5 +0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 +0.0 -0.0 +1.2
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.0 +0.3 +0.1 +0.9
growth on oleic acid YNB Glucose +0.3 +0.1 +0.6 +0.3 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 +0.1 +0.2 +0.9
auxotrophy YNB Glucose +0.2 +0.3 +0.8 +0.2 +0.4
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