Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15384 and 15385 are separated by 113 nucleotides15385 and 15386 are separated by 583 nucleotides15386 and 15387 are separated by 216 nucleotides15387 and 15388 are separated by 194 nucleotides mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680,551 to 683,526 15384 mRNA_7017: 15385 - K03574 mutT, NUDT15, MTH2 8-oxo-dGTP diphosphatase, at 683,640 to 684,233 15385 mRNA_7018: 15386 - Hypothetical Protein, at 684,817 to 685,871 15386 mRNA_7019: 15387 - K13212 LUC7L2 RNA-binding protein Luc7-like 2, at 686,088 to 688,034 15387 mRNA_7020: 15388 - K11446 KDM5, JARID1 histone demethylase JARID1, at 688,229 to 691,595 15388
Group Condition mRNA_7016 mRNA_7017 mRNA_7018 mRNA_7019 mRNA_7020
15384 15385 15386 15387 15388
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -1.6 -0.2 +0.0 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2 +0.2 -0.8 -1.9
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -2.4 -0.6 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -1.0 +0.2 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.5 -0.3 +0.2 -0.8
growth on ypd YPD +0.2 -0.9 +0.1 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.0 +0.3 -0.4 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.5 -0.5 +0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 +0.3 -0.1 -0.9
growth on ricinoleic acid YNB Glucose +0.1 -0.6 -0.0 +0.5 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.6 +0.2 +0.2 -0.1
auxotrophy Dropout Complete +0.1 +0.5 -0.2 +0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 +0.2 +0.9 -0.8
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +0.2 -0.1 +0.5
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.3 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.3 +0.1 +0.9 -0.5
growth on oleic acid YNB Glucose +0.1 +0.6 +0.3 +0.4 -0.5
auxotrophy YNB Glucose +0.3 +0.8 +0.2 +0.4 -0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.5 +0.2 +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.5 +0.5 +0.9 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.0 -0.0 +1.2 +0.2
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