Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15389 and 15390 are separated by 282 nucleotides15390 and 15391 are separated by 200 nucleotides15391 and 15392 are separated by 129 nucleotides15392 and 15393 are separated by 253 nucleotides mRNA_7021: 15389 - K21027 TRMU, SLM3 tRNA-5-taurinomethyluridine 2-sulfurtransferase, at 692,794 to 694,459 15389 mRNA_7022: 15390 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 694,742 to 696,268 15390 mRNA_7023: 15391 - Interpro RNA polymerase I-specific transcription-initiation factor, at 696,469 to 700,104 15391 mRNA_7024: 15392 - K02179 BUB2 cell cycle arrest protein BUB2, at 700,234 to 701,558 15392 mRNA_7025: 15393 - K13122 FRG1 protein FRG1, at 701,812 to 702,904 15393
Group Condition mRNA_7021 mRNA_7022 mRNA_7023 mRNA_7024 mRNA_7025
15389 15390 15391 15392 15393
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.3 N.D. +0.1 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 -0.4 N.D. +0.4 -1.2
growth on oleic acid YNB Oleic Acid -0.9 -0.2 N.D. +0.0 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 +0.3 N.D. +0.3 -0.7
growth on ricinoleic acid YNB Glucose -0.3 -0.2 N.D. +0.3 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.0 N.D. -0.8 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 N.D. +0.0 -0.7
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 N.D. +0.2 -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 N.D. +0.1 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 N.D. +0.0 -0.1
auxotrophy YNB Glucose -0.2 -0.2 N.D. +0.5 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 N.D. +0.4 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 N.D. +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.2 N.D. -0.4 -0.1
growth on oleic acid YNB Glucose +0.1 +0.0 N.D. +0.4 -0.4
auxotrophy Dropout Complete +0.1 +0.0 N.D. +0.4 -0.5
growth on ypd YPD +0.3 +0.0 N.D. +0.7 -1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 N.D. +0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 N.D. +0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.2 N.D. -0.3 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.0 N.D. +0.4 -0.2
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