Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15390 and 15391 are separated by 200 nucleotides15391 and 15392 are separated by 129 nucleotides15392 and 15393 are separated by 253 nucleotides15393 and 15394 are separated by 182 nucleotides mRNA_7022: 15390 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 694,742 to 696,268 15390 mRNA_7023: 15391 - Interpro RNA polymerase I-specific transcription-initiation factor, at 696,469 to 700,104 15391 mRNA_7024: 15392 - K02179 BUB2 cell cycle arrest protein BUB2, at 700,234 to 701,558 15392 mRNA_7025: 15393 - K13122 FRG1 protein FRG1, at 701,812 to 702,904 15393 mRNA_7026: 15394 - K12827 SF3A3, SAP61, PRP9 splicing factor 3A subunit 3, at 703,087 to 704,939 15394
Group Condition mRNA_7022 mRNA_7023 mRNA_7024 mRNA_7025 mRNA_7026
15390 15391 15392 15393 15394
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. +0.1 -1.7 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. +0.4 -1.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.8 -0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.3 -0.9 N.D.
growth on oleic acid YNB Oleic Acid -0.2 N.D. +0.0 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.4 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.2 -0.8 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.0 -0.7 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. +0.4 -0.8 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.1 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.0 -0.3 N.D.
auxotrophy YNB Glucose -0.2 N.D. +0.5 -0.6 N.D.
growth on ypd YPD +0.0 N.D. +0.7 -1.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. +0.3 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.3 +0.3 N.D.
auxotrophy Dropout Complete +0.0 N.D. +0.4 -0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. +0.0 -0.1 N.D.
growth on oleic acid YNB Glucose +0.0 N.D. +0.4 -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. +0.4 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.3 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.3 -0.1 N.D.
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