Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15398 and 15399 are separated by 1040 nucleotides15399 and 15400 are separated by 138 nucleotides15400 and 15401 are separated by 503 nucleotides15401 and 15402 are separated by 914 nucleotides mRNA_7030: 15398 - SUPERFAMILY--SSF50685, at 710,305 to 711,678 15398 mRNA_7031: 15399 - K03131 TAF6 transcription initiation factor TFIID subunit 6, at 712,719 to 714,354 15399 mRNA_7032: 15400 - Hypothetical Protein, at 714,493 to 715,089 15400 mRNA_7033: 15401 - Hypothetical Protein, at 715,593 to 716,570 15401 mRNA_7034: 15402 - HMMPfam-UBA/TS-N domain-PF00627,HMMPfam-Uncharacterized conserved protein (DUF2196)-PF09962,ProSiteProfiles-Ubiquitin-associated domain (UBA) profile.-PS50030,SUPERFAMILY--SSF46934, at 717,485 to 718,005 15402
Group Condition mRNA_7030 mRNA_7031 mRNA_7032 mRNA_7033 mRNA_7034
15398 15399 15400 15401 15402
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -1.4 -1.2 +0.2
auxotrophy YNB Glucose -0.0 N.D. +0.3 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.3 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.2 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.1 -0.3 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.1 -0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. +0.1 -0.2 +0.3
growth on ricinoleic acid YNB Glucose +0.4 N.D. +0.3 -0.3 -0.1
auxotrophy Dropout Complete +0.2 N.D. +0.3 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. +0.6 -0.6 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.1 +0.6 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.7 -0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.1 +0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. +0.3 +0.2 +0.3
growth on oleic acid YNB Glucose +0.4 N.D. +0.4 -0.5 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.2 +0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 N.D. +0.1 +0.1 +0.5
growth on ypd YPD +0.2 N.D. +0.3 -0.2 +0.9
growth on ricinoleic acid YNB Methylricinoleic Acid +1.2 N.D. +0.8 -0.2 -0.0
growth on oleic acid YNB Oleic Acid +0.7 N.D. +0.3 +0.1 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid +1.2 N.D. +0.6 +0.4 -0.1
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