Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15402 and 15403 are separated by 316 nucleotides15403 and 15404 are separated by 874 nucleotides15404 and 15405 are separated by 120 nucleotides15405 and 15406 are separated by 548 nucleotides mRNA_7034: 15402 - HMMPfam-UBA/TS-N domain-PF00627,HMMPfam-Uncharacterized conserved protein (DUF2196)-PF09962,ProSiteProfiles-Ubiquitin-associated domain (UBA) profile.-PS50030,SUPERFAMILY--SSF46934, at 717,485 to 718,005 15402 mRNA_7035: 15403 - K11826 AP2M1 AP-2 complex subunit mu-1, at 718,322 to 720,163 15403 mRNA_7036: 15404 - K00831 serC, PSAT1 phosphoserine aminotransferase, at 721,038 to 722,425 15404 mRNA_7037: 15405 - K08254 E3.2.1.59 glucan endo-1,3-alpha-glucosidase, at 722,546 to 724,803 15405 mRNA_7038: 15406 - K15458 SAP185_190 SIT4-associating protein SAP185/190, at 725,352 to 729,605 15406
Group Condition mRNA_7034 mRNA_7035 mRNA_7036 mRNA_7037 mRNA_7038
15402 15403 15404 15405 15406
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. N.D. -0.5 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. -0.1 -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. N.D. -0.3 -0.5
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. -0.6 -0.3
growth on ricinoleic acid YNB Glucose -0.1 N.D. N.D. -0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. -0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. N.D. -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. N.D. -0.1 -0.5
auxotrophy Dropout Complete +0.0 N.D. N.D. -0.0 -0.3
auxotrophy YNB Glucose -0.1 N.D. N.D. -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.4 N.D. N.D. -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.3 +0.3
growth on oleic acid YNB Oleic Acid +0.6 N.D. N.D. -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. N.D. +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. N.D. -0.1 -0.0
growth on oleic acid YNB Glucose +0.6 N.D. N.D. +0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. N.D. -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. N.D. +0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.5 N.D. N.D. -0.1 +0.3
growth on ypd YPD +0.9 N.D. N.D. +0.5 -0.4
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