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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15404 and 15405 are separated by 120 nucleotides
15405 and 15406 are separated by 548 nucleotides
15406 and 15407 are separated by 350 nucleotides
15407 and 15408 are separated by 1124 nucleotides
mRNA_7036: 15404 - K00831 serC, PSAT1 phosphoserine aminotransferase, at 721,038 to 722,425
15404
mRNA_7037: 15405 - K08254 E3.2.1.59 glucan endo-1,3-alpha-glucosidase, at 722,546 to 724,803
15405
mRNA_7038: 15406 - K15458 SAP185_190 SIT4-associating protein SAP185/190, at 725,352 to 729,605
15406
mRNA_7039: 15407 - Hypothetical Protein, at 729,956 to 731,972
15407
mRNA_7040: 15408 - Hypothetical Protein, at 733,097 to 733,346
15408
Group
Condition
mRNA
_7036
mRNA
_7037
mRNA
_7038
mRNA
_7039
mRNA
_7040
15404
15405
15406
15407
15408
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
-1.0
-0.6
+0.2
growth on ypd
YPD
N.D.
+0.5
-0.4
-0.3
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.3
-0.5
+0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
-0.5
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.5
-0.4
+0.3
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
-0.4
+0.3
-0.4
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.6
-0.3
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
-0.3
+0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
+0.3
-0.3
-0.4
growth on oleic acid
YNB Oleic Acid
N.D.
-0.2
-0.2
+0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
-0.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.3
-0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.5
-0.1
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.0
-0.1
-0.1
+0.1
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.4
+0.3
-0.1
auxotrophy
Dropout Complete
N.D.
-0.0
-0.3
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
-0.1
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
+0.2
-0.1
+0.1
auxotrophy
YNB Glucose
N.D.
-0.1
-0.0
+0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.2
-0.3
+0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
-0.0
+0.4
-0.1
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