Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15405 and 15406 are separated by 548 nucleotides15406 and 15407 are separated by 350 nucleotides15407 and 15408 are separated by 1124 nucleotides15408 and 15409 are separated by 436 nucleotides mRNA_7037: 15405 - K08254 E3.2.1.59 glucan endo-1,3-alpha-glucosidase, at 722,546 to 724,803 15405 mRNA_7038: 15406 - K15458 SAP185_190 SIT4-associating protein SAP185/190, at 725,352 to 729,605 15406 mRNA_7039: 15407 - Hypothetical Protein, at 729,956 to 731,972 15407 mRNA_7040: 15408 - Hypothetical Protein, at 733,097 to 733,346 15408 mRNA_7041: 15409 - KOG1577 Aldo/keto reductase family proteins, at 733,783 to 735,045 15409
Group Condition mRNA_7037 mRNA_7038 mRNA_7039 mRNA_7040 mRNA_7041
15405 15406 15407 15408 15409
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.0 -0.6 +0.2 N.D.
growth on ypd YPD +0.5 -0.4 -0.3 -0.9 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.5 +0.2 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.5 -0.1 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.4 +0.3 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.4 +0.3 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.3 +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.2 -0.3 +0.1 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.3 -0.3 -0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.2 -0.2 +0.3 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.3 -0.0 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.1 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 -0.1 +0.1 N.D.
growth on oleic acid YNB Glucose +0.0 -0.4 +0.3 -0.1 N.D.
auxotrophy Dropout Complete -0.0 -0.3 +0.3 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.2 -0.1 +0.1 N.D.
auxotrophy YNB Glucose -0.1 -0.0 +0.1 -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.2 -0.3 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 +0.4 -0.1 N.D.
remove
mRNA_7037
plot
remove
mRNA_7038
plot
remove
mRNA_7039
remove
mRNA_7040
plot
remove
mRNA_7041
plot