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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15408 and 15409 are separated by 436 nucleotides
15409 and 15410 are separated by 406 nucleotides
15410 and 15411 are separated by 271 nucleotides
15411 and 15412 are separated by 194 nucleotides
mRNA_7040: 15408 - Hypothetical Protein, at 733,097 to 733,346
15408
mRNA_7041: 15409 - KOG1577 Aldo/keto reductase family proteins, at 733,783 to 735,045
15409
mRNA_7042: 15410 - Hypothetical Protein, at 735,452 to 736,654
15410
mRNA_7043: 15411 - Hypothetical Protein, at 736,926 to 740,766
15411
mRNA_7044: 15412 - KOG4299 PHD Zn-finger protein, at 740,961 to 743,698
15412
Group
Condition
mRNA
_7040
mRNA
_7041
mRNA
_7042
mRNA
_7043
mRNA
_7044
15408
15409
15410
15411
15412
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
N.D.
-1.3
-0.2
-0.9
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
N.D.
-0.6
+0.0
-1.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
N.D.
-0.9
-0.0
-0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
N.D.
+0.2
+0.0
-2.1
growth on ypd
YPD
-0.9
N.D.
-0.7
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
-1.2
+0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
N.D.
-0.1
-0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
N.D.
-1.0
+0.1
+0.4
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
-0.0
+0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
+0.3
-0.6
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
+0.4
-0.4
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
+0.2
+0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
+0.3
+0.0
+0.5
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
+0.0
+0.1
+1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
N.D.
+0.1
+0.0
+1.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
-0.7
-0.1
+1.4
auxotrophy
Dropout Complete
-0.0
N.D.
-0.1
-0.1
+1.0
growth on oleic acid
YNB Glucose
-0.1
N.D.
+0.3
-0.1
+0.9
auxotrophy
YNB Glucose 75mM Arginine
-0.1
N.D.
-0.0
+0.3
+0.9
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
+0.3
+0.2
+0.9
auxotrophy
YNB Glucose
-0.0
N.D.
+0.3
+0.3
+1.2
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