Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15414 and 15415 are separated by 388 nucleotides15415 and 15416 are separated by 378 nucleotides15416 and 15417 are separated by 1118 nucleotides15417 and 15418 are separated by 70 nucleotides mRNA_7046: 15414 - K01341 KEX2 kexin, at 748,677 to 751,864 15414 mRNA_7047: 15415 - K07466 RFA1, RPA1, rpa replication factor A1, at 752,253 to 754,600 15415 mRNA_7048: 15416 - KOG2476 Uncharacterized conserved protein, at 754,979 to 757,509 15416 mRNA_7049: 15417 - KOG0565 Inositol polyphosphate 5-phosphatase and related proteins, at 758,628 to 760,981 15417 mRNA_7050: 15418 - K08678 UXS1, uxs UDP-glucuronate decarboxylase, at 761,052 to 762,821 15418
Group Condition mRNA_7046 mRNA_7047 mRNA_7048 mRNA_7049 mRNA_7050
15414 15415 15416 15417 15418
facs on lipid accumulation Sorted High BODIPY Gate -1.0 N.D. +0.2 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. -0.2 +0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.5 N.D. +0.1 -0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 N.D. -0.1 -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. +0.1 -0.2 +0.0
auxotrophy Dropout Complete +0.3 N.D. +0.2 -0.6 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. +0.3 -0.7 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.4 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. +0.5 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.3 +0.0 +0.1
growth on oleic acid YNB Glucose +0.3 N.D. +0.0 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. +0.3 -0.4 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.3 -0.3 +0.6
growth on ypd YPD -0.8 N.D. +0.3 +0.6 +0.6
growth on ricinoleic acid YNB Glucose +0.5 N.D. +0.4 -0.6 +0.4
auxotrophy YNB Glucose +0.7 N.D. +0.5 -0.6 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 N.D. +0.3 +0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.3 +0.4 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 N.D. +0.1 -0.5 +0.8
ypd buoyancy 40 hrs Low Buoyancy +0.8 N.D. +0.3 +0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.9 N.D. +0.1 +0.4 +0.2
remove
mRNA_7046
plot
remove
mRNA_7047
plot
remove
mRNA_7048
remove
mRNA_7049
plot
remove
mRNA_7050
plot