Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15417 and 15418 are separated by 70 nucleotides15418 and 15419 are separated by 241 nucleotides15419 and 15420 are separated by 393 nucleotides15420 and 15421 are separated by 286 nucleotides mRNA_7049: 15417 - KOG0565 Inositol polyphosphate 5-phosphatase and related proteins, at 758,628 to 760,981 15417 mRNA_7050: 15418 - K08678 UXS1, uxs UDP-glucuronate decarboxylase, at 761,052 to 762,821 15418 mRNA_7051: 15419 - HMMPfam-Translation initiation factor eIF3 subunit-PF08597, at 763,063 to 764,121 15419 mRNA_7052: 15420 - K01624 FBA, fbaA fructose-bisphosphate aldolase, class II, at 764,515 to 766,298 15420 mRNA_7053: 15421 - K01192 E3.2.1.25, MANBA, manB beta-mannosidase, at 766,585 to 770,373 15421
Group Condition mRNA_7049 mRNA_7050 mRNA_7051 mRNA_7052 mRNA_7053
15417 15418 15419 15420 15421
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.0 N.D. N.D. -0.3
auxotrophy Dropout Complete -0.6 +0.2 N.D. N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.1 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine -0.7 +0.2 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.6 +0.4 N.D. N.D. -0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.0 N.D. N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.3 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.0 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.2 N.D. N.D. +0.1
growth on oleic acid YNB Glucose +0.1 -0.1 N.D. N.D. -0.1
auxotrophy YNB Glucose -0.6 +0.2 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.2 N.D. N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.3 N.D. N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.8 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 N.D. N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.2 N.D. N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.6 N.D. N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.3 N.D. N.D. -0.2
growth on ypd YPD +0.6 +0.6 N.D. N.D. +0.5
remove
mRNA_7049
plot
remove
mRNA_7050
plot
remove
mRNA_7051
remove
mRNA_7052
plot
remove
mRNA_7053
plot