Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15418 and 15419 are separated by 241 nucleotides15419 and 15420 are separated by 393 nucleotides15420 and 15421 are separated by 286 nucleotides15421 and 15422 are separated by 233 nucleotides mRNA_7050: 15418 - K08678 UXS1, uxs UDP-glucuronate decarboxylase, at 761,052 to 762,821 15418 mRNA_7051: 15419 - HMMPfam-Translation initiation factor eIF3 subunit-PF08597, at 763,063 to 764,121 15419 mRNA_7052: 15420 - K01624 FBA, fbaA fructose-bisphosphate aldolase, class II, at 764,515 to 766,298 15420 mRNA_7053: 15421 - K01192 E3.2.1.25, MANBA, manB beta-mannosidase, at 766,585 to 770,373 15421 mRNA_7054: 15422 - K14018 PLAA, DOA1, UFD3 phospholipase A-2-activating protein, at 770,607 to 773,938 15422
Group Condition mRNA_7050 mRNA_7051 mRNA_7052 mRNA_7053 mRNA_7054
15418 15419 15420 15421 15422
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. N.D. -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. N.D. -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. N.D. -0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.0 N.D. N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. N.D. +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. -0.4 N.D.
growth on oleic acid YNB Glucose -0.1 N.D. N.D. -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. N.D. -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. N.D. -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. N.D. -0.2 N.D.
auxotrophy Dropout Complete +0.2 N.D. N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. N.D. +0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.4 N.D. N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. N.D. +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. N.D. +0.2 N.D.
auxotrophy YNB Glucose +0.2 N.D. N.D. +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 N.D. N.D. -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 N.D. N.D. +0.2 N.D.
growth on ypd YPD +0.6 N.D. N.D. +0.5 N.D.
remove
mRNA_7050
plot		 remove
mRNA_7051
plot		 remove
mRNA_7052		 remove
mRNA_7053
plot		 remove
mRNA_7054
plot