Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15419 and 15420 are separated by 393 nucleotides15420 and 15421 are separated by 286 nucleotides15421 and 15422 are separated by 233 nucleotides15422 and 15423 are separated by 278 nucleotides mRNA_7051: 15419 - HMMPfam-Translation initiation factor eIF3 subunit-PF08597, at 763,063 to 764,121 15419 mRNA_7052: 15420 - K01624 FBA, fbaA fructose-bisphosphate aldolase, class II, at 764,515 to 766,298 15420 mRNA_7053: 15421 - K01192 E3.2.1.25, MANBA, manB beta-mannosidase, at 766,585 to 770,373 15421 mRNA_7054: 15422 - K14018 PLAA, DOA1, UFD3 phospholipase A-2-activating protein, at 770,607 to 773,938 15422 mRNA_7055: 15423 - K03841 FBP, fbp fructose-1,6-bisphosphatase I, at 774,217 to 775,850 15423
Group Condition mRNA_7051 mRNA_7052 mRNA_7053 mRNA_7054 mRNA_7055
15419 15420 15421 15422 15423
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.0 N.D. -1.9
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.2 N.D. -1.9
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.1 N.D. -1.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.3 N.D. -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.1 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.2 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.2 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.3 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.1 N.D. -0.2
auxotrophy Dropout Complete N.D. N.D. +0.0 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.1 N.D. -0.0
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.0 N.D. +0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.4 N.D. +0.5
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.2 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.2 N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.3 N.D. +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.2 N.D. -0.0
auxotrophy YNB Glucose N.D. N.D. +0.4 N.D. +0.1
growth on ypd YPD N.D. N.D. +0.5 N.D. +0.2
remove
mRNA_7051
plot		 remove
mRNA_7052
plot		 remove
mRNA_7053		 remove
mRNA_7054
plot		 remove
mRNA_7055
plot