Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15426 and 15427 are separated by 218 nucleotides
15427 and 15428 are separated by 152 nucleotides
15428 and 15429 are separated by 851 nucleotides
15429 and 15430 are separated by 293 nucleotides
mRNA_7058: 15426 - KOG0206 P-type ATPase, at 779,457 to 784,844
15426
mRNA_7059: 15427 - BLAST golgi apparatus membrane protein [Pochonia chlamy..., at 785,063 to 786,823
15427
mRNA_7060: 15428 - HMMPfam-Proteolipid membrane potential modulator-PF01679, at 786,976 to 788,620
15428
mRNA_7061: 15429 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 789,472 to 792,234
15429
mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792,528 to 793,710
15430
Group
Condition
mRNA
_7058
mRNA
_7059
mRNA
_7060
mRNA
_7061
mRNA
_7062
15426
15427
15428
15429
15430
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.6
+0.1
N.D.
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.2
N.D.
-0.3
-1.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.2
N.D.
-0.5
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.0
N.D.
-0.6
-0.6
growth on oleic acid
YNB Oleic Acid
+0.0
+0.0
N.D.
+0.2
-1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.8
-0.0
N.D.
-0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
+0.1
N.D.
-0.6
+0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
-0.2
N.D.
-0.2
+0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.0
N.D.
-0.3
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.1
N.D.
-0.0
-0.2
growth on ypd
YPD
-0.1
+0.3
N.D.
-0.2
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.0
N.D.
+0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.3
N.D.
+0.2
-0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.1
N.D.
+0.4
-0.2
growth on oleic acid
YNB Glucose
-0.0
-0.1
N.D.
+0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.8
N.D.
-0.7
+0.7
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.5
N.D.
+0.1
-0.2
auxotrophy
YNB Glucose
-0.2
+0.3
N.D.
+0.1
+0.0
growth on ricinoleic acid
YNB Glucose
-0.3
-0.0
N.D.
-0.1
+0.9
auxotrophy
Dropout Complete
+0.1
+0.0
N.D.
+0.2
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.3
N.D.
+0.3
+0.0
remove
mRNA_7058
plot
remove
mRNA_7059
plot
remove
mRNA_7060
remove
mRNA_7061
plot
remove
mRNA_7062
plot