Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15428 and 15429 are separated by 851 nucleotides15429 and 15430 are separated by 293 nucleotides15430 and 15431 are separated by 11 nucleotides15431 and 15432 are separated by 1722 nucleotides mRNA_7060: 15428 - HMMPfam-Proteolipid membrane potential modulator-PF01679, at 786,976 to 788,620 15428 mRNA_7061: 15429 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 789,472 to 792,234 15429 mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792,528 to 793,710 15430 mRNA_7063: 15431 - Hypothetical Protein, at 793,722 to 794,198 15431 mRNA_7064: 15432 - K12778 HOP1 meiosis-specific protein HOP1, at 795,921 to 797,535 15432
Group Condition mRNA_7060 mRNA_7061 mRNA_7062 mRNA_7063 mRNA_7064
15428 15429 15430 15431 15432
growth on ypd YPD N.D. -0.2 -0.4 -0.5 -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.2 -1.0 -0.4 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 -0.4 -0.4 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 -0.2 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -1.2 +1.3 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.2 +0.3 -0.3
growth on oleic acid YNB Glucose N.D. +0.1 +0.0 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 -0.5 +0.7 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 +0.0 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 +0.2 -0.5 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.5 -0.3 +0.8 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.7 +0.7 +0.5 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.6 +1.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.6 -0.6 +1.2 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 -0.2 +0.4 -0.0
auxotrophy YNB Glucose N.D. +0.1 +0.0 +0.1 +0.4
auxotrophy Dropout Complete N.D. +0.2 +0.3 +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.3 +0.3 +0.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.8 +0.4 +0.4
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.9 +0.4 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 +0.7 +1.2 +0.2
remove
mRNA_7060
plot
remove
mRNA_7061
plot
remove
mRNA_7062
remove
mRNA_7063
plot
remove
mRNA_7064
plot