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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15428 and 15429 are separated by 851 nucleotides
15429 and 15430 are separated by 293 nucleotides
15430 and 15431 are separated by 11 nucleotides
15431 and 15432 are separated by 1722 nucleotides
mRNA_7060: 15428 - HMMPfam-Proteolipid membrane potential modulator-PF01679, at 786,976 to 788,620
15428
mRNA_7061: 15429 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 789,472 to 792,234
15429
mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792,528 to 793,710
15430
mRNA_7063: 15431 - Hypothetical Protein, at 793,722 to 794,198
15431
mRNA_7064: 15432 - K12778 HOP1 meiosis-specific protein HOP1, at 795,921 to 797,535
15432
Group
Condition
mRNA
_7060
mRNA
_7061
mRNA
_7062
mRNA
_7063
mRNA
_7064
15428
15429
15430
15431
15432
growth on ypd
YPD
N.D.
-0.2
-0.4
-0.5
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
-1.0
-0.4
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
-0.4
-0.4
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
-0.2
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
-1.2
+1.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
-0.2
+0.3
-0.3
growth on oleic acid
YNB Glucose
N.D.
+0.1
+0.0
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
-0.5
+0.7
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.3
+0.0
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.3
+0.2
-0.5
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.5
-0.3
+0.8
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.7
+0.7
+0.5
-0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
-0.6
+1.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.6
-0.6
+1.2
+0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.4
-0.2
+0.4
-0.0
auxotrophy
YNB Glucose
N.D.
+0.1
+0.0
+0.1
+0.4
auxotrophy
Dropout Complete
N.D.
+0.2
+0.3
+0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
+0.3
+0.3
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
+0.8
+0.4
+0.4
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
+0.9
+0.4
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.6
+0.7
+1.2
+0.2
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