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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15429 and 15430 are separated by 293 nucleotides
15430 and 15431 are separated by 11 nucleotides
15431 and 15432 are separated by 1722 nucleotides
15432 and 15433 are separated by 158 nucleotides
mRNA_7061: 15429 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 789,472 to 792,234
15429
mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792,528 to 793,710
15430
mRNA_7063: 15431 - Hypothetical Protein, at 793,722 to 794,198
15431
mRNA_7064: 15432 - K12778 HOP1 meiosis-specific protein HOP1, at 795,921 to 797,535
15432
mRNA_7065: 15433 - K03469 rnhA, RNASEH1 ribonuclease HI, at 797,694 to 798,933
15433
Group
Condition
mRNA
_7061
mRNA
_7062
mRNA
_7063
mRNA
_7064
mRNA
_7065
15429
15430
15431
15432
15433
growth on ypd
YPD
-0.2
-0.4
-0.5
-0.1
-0.0
growth on oleic acid
YNB Oleic Acid
+0.2
-1.0
-0.4
+0.0
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.2
-0.3
+0.3
-0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.2
+0.3
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.5
+0.7
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-1.2
+1.3
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.3
+0.8
+0.3
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.7
+0.5
-0.0
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.6
+1.2
+0.4
-0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.4
-0.4
+0.4
+0.3
growth on oleic acid
YNB Glucose
+0.1
+0.0
+0.1
-0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.0
-0.1
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.6
+1.0
-0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.2
-0.5
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-0.2
+0.4
-0.0
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.8
+0.4
+0.4
-0.6
auxotrophy
Dropout Complete
+0.2
+0.3
+0.2
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.3
+0.3
+0.6
+0.2
auxotrophy
YNB Glucose
+0.1
+0.0
+0.1
+0.4
+0.5
growth on ricinoleic acid
YNB Glucose
-0.1
+0.9
+0.4
+0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
+0.7
+1.2
+0.2
+0.2
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