Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15429 and 15430 are separated by 293 nucleotides15430 and 15431 are separated by 11 nucleotides15431 and 15432 are separated by 1722 nucleotides15432 and 15433 are separated by 158 nucleotides mRNA_7061: 15429 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 789,472 to 792,234 15429 mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792,528 to 793,710 15430 mRNA_7063: 15431 - Hypothetical Protein, at 793,722 to 794,198 15431 mRNA_7064: 15432 - K12778 HOP1 meiosis-specific protein HOP1, at 795,921 to 797,535 15432 mRNA_7065: 15433 - K03469 rnhA, RNASEH1 ribonuclease HI, at 797,694 to 798,933 15433
Group Condition mRNA_7061 mRNA_7062 mRNA_7063 mRNA_7064 mRNA_7065
15429 15430 15431 15432 15433
growth on ypd YPD -0.2 -0.4 -0.5 -0.1 -0.0
growth on oleic acid YNB Oleic Acid +0.2 -1.0 -0.4 +0.0 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 -0.3 +0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 +0.3 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.5 +0.7 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -1.2 +1.3 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.3 +0.8 +0.3 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.7 +0.5 -0.0 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.6 +1.2 +0.4 -0.6
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.4 -0.4 +0.4 +0.3
growth on oleic acid YNB Glucose +0.1 +0.0 +0.1 -0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.0 -0.1 -0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.6 +1.0 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 -0.5 +0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.2 +0.4 -0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.8 +0.4 +0.4 -0.6
auxotrophy Dropout Complete +0.2 +0.3 +0.2 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 +0.3 +0.6 +0.2
auxotrophy YNB Glucose +0.1 +0.0 +0.1 +0.4 +0.5
growth on ricinoleic acid YNB Glucose -0.1 +0.9 +0.4 +0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.7 +1.2 +0.2 +0.2
remove
mRNA_7061
plot
remove
mRNA_7062
plot
remove
mRNA_7063
remove
mRNA_7064
plot
remove
mRNA_7065
plot