Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15434 and 15435 are separated by 404 nucleotides
15435 and 15436 are separated by 477 nucleotides
15436 and 15437 are separated by 159 nucleotides
15437 and 15438 are separated by 657 nucleotides
mRNA_7066: 15434 - K00799 GST, gst glutathione S-transferase, at 799,211 to 800,128
15434
mRNA_7067: 15435 - K13507 GAT glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase, at 800,533 to 803,766
15435
mRNA_7068: 15436 - K00167 BCKDHB, bkdA2 2-oxoisovalerate dehydrogenase E1 component beta subunit, at 804,244 to 806,337
15436
mRNA_7069: 15437 - HMMPfam-DNA-directed RNA polymerase III subunit Rpc31-PF11705, at 806,497 to 812,015
15437
mRNA_7070: 15438 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 812,673 to 814,209
15438
Group
Condition
mRNA
_7066
mRNA
_7067
mRNA
_7068
mRNA
_7069
mRNA
_7070
15434
15435
15436
15437
15438
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
N.D.
+0.0
-0.0
+0.1
growth on ypd
YPD
+0.1
N.D.
-0.4
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.1
-0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
N.D.
+0.5
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
N.D.
-0.5
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.5
N.D.
+0.3
+0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
N.D.
+0.2
+0.3
+0.4
growth on oleic acid
YNB Oleic Acid
+0.7
N.D.
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.5
N.D.
-0.0
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
+0.4
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
N.D.
-0.1
+0.0
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
N.D.
+0.0
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
+0.3
-0.1
+0.3
growth on oleic acid
YNB Glucose
+0.7
N.D.
+0.0
-0.0
-0.1
auxotrophy
Dropout Complete
+0.5
N.D.
-0.1
-0.0
+0.4
growth on ricinoleic acid
YNB Glucose
+0.3
N.D.
+0.3
-0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
+0.7
-0.2
+0.6
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
+0.4
+0.1
+0.2
auxotrophy
YNB Glucose
+0.3
N.D.
+0.3
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.6
N.D.
+0.3
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.8
N.D.
-0.0
+0.2
+0.2
remove
mRNA_7066
plot
remove
mRNA_7067
plot
remove
mRNA_7068
remove
mRNA_7069
plot
remove
mRNA_7070
plot