Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15438 and 15439 are separated by 370 nucleotides15439 and 15440 are separated by 286 nucleotides15440 and 15441 are separated by 595 nucleotides15441 and 15442 are separated by 1259 nucleotides mRNA_7070: 15438 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 812,673 to 814,209 15438 mRNA_7071: 15439 - BLAST histone H3 h3.1 [Schizosaccharomyces japonicus yF..., at 814,580 to 815,327 15439 mRNA_7072: 15440 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 815,614 to 818,476 15440 mRNA_7073: 15441 - HMMPfam-Domain of unknown function DUF77-PF01910,SUPERFAMILY--SSF89957,TIGRFAM-TIGR00106 uncharacterized protein, MTH1187 family-TIGR00106, at 819,072 to 820,252 15441 mRNA_7074: 15442 - K02218 CSNK1, CKI casein kinase 1, at 821,512 to 823,166 15442
Group Condition mRNA_7070 mRNA_7071 mRNA_7072 mRNA_7073 mRNA_7074
15438 15439 15440 15441 15442
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.9 -0.6 -2.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.4 -0.5 -0.1 N.D.
auxotrophy YNB Glucose +0.2 +0.3 +0.0 -0.8 N.D.
auxotrophy Dropout Complete +0.4 +0.3 +0.1 -0.9 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.4 -0.4 -0.1 N.D.
growth on ypd YPD -0.2 -0.0 +0.5 +0.0 N.D.
growth on oleic acid YNB Glucose -0.1 +0.6 +0.3 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 -0.4 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.8 -0.2 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.8 -0.0 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.5 +0.0 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 +0.2 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.5 -0.2 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 +0.0 +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +1.1 -0.4 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.4 +0.1 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 +0.5 +0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.0 +1.5 +0.4 -0.5 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +1.1 +0.3 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +2.3 +0.8 +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +2.2 +0.7 +0.9 N.D.
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