Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15442 and 15443 are separated by 541 nucleotides15443 and 15444 are separated by 1064 nucleotides15444 and 15445 are separated by 169 nucleotides15445 and 15446 are separated by 454 nucleotides mRNA_7074: 15442 - K02218 CSNK1, CKI casein kinase 1, at 821,512 to 823,166 15442 mRNA_7075: 15443 - HMMPfam-Late embryogenesis abundant protein-PF03168,SUPERFAMILY--SSF117070, at 823,708 to 824,890 15443 mRNA_7076: 15444 - K17413 MRPS35 small subunit ribosomal protein S35, at 825,955 to 826,915 15444 mRNA_7077: 15445 - K18789 XGD1 xylogalacturonan beta-1,3-xylosyltransferase, at 827,085 to 831,280 15445 mRNA_7078: 15446 - Hypothetical Protein, at 831,735 to 832,558 15446
Group Condition mRNA_7074 mRNA_7075 mRNA_7076 mRNA_7077 mRNA_7078
15442 15443 15444 15445 15446
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 N.D. -0.7 -1.0
growth on ypd YPD N.D. -0.4 N.D. +0.2 -0.6
growth on ricinoleic acid YNB Glucose N.D. -0.4 N.D. +0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 N.D. -0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 N.D. +0.9 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.7 N.D. +0.8 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 N.D. -0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.9 N.D. +0.7 +0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 N.D. +0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.6 N.D. -0.0 +1.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 N.D. +0.6 +0.9
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 N.D. +0.6 +0.9
growth on oleic acid YNB Oleic Acid N.D. +0.1 N.D. +0.9 +0.1
growth on oleic acid YNB Glucose N.D. +0.5 N.D. +0.5 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 N.D. +0.2 +0.9
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 N.D. +0.1 +1.3
auxotrophy Dropout Complete N.D. +0.3 N.D. +0.5 +1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 N.D. +0.0 +1.7
auxotrophy YNB Glucose N.D. +0.4 N.D. +0.3 +1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 N.D. +0.1 +1.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 N.D. -0.1 +2.4
remove
mRNA_7074
plot
remove
mRNA_7075
plot
remove
mRNA_7076
remove
mRNA_7077
plot
remove
mRNA_7078
plot