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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15444 and 15445 are separated by 169 nucleotides
15445 and 15446 are separated by 454 nucleotides
15446 and 15447 are separated by 462 nucleotides
15447 and 15448 are separated by 138 nucleotides
mRNA_7076: 15444 - K17413 MRPS35 small subunit ribosomal protein S35, at 825,955 to 826,915
15444
mRNA_7077: 15445 - K18789 XGD1 xylogalacturonan beta-1,3-xylosyltransferase, at 827,085 to 831,280
15445
mRNA_7078: 15446 - Hypothetical Protein, at 831,735 to 832,558
15446
mRNA_7079: 15447 - Hypothetical Protein, at 833,021 to 833,925
15447
mRNA_7080: 15448 - K12481 RBSN, ZFYVE20 rabenosyn-5, at 834,064 to 836,328
15448
Group
Condition
mRNA
_7076
mRNA
_7077
mRNA
_7078
mRNA
_7079
mRNA
_7080
15444
15445
15446
15447
15448
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.7
-1.0
+0.2
-1.1
growth on oleic acid
YNB Glucose
N.D.
+0.5
+0.3
-0.1
-2.6
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
+0.9
-0.2
-2.8
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
-0.3
-0.2
-0.5
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.2
-0.0
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.0
+1.3
-0.2
-1.5
growth on ricinoleic acid
YNB Glucose
N.D.
+0.2
-0.3
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.6
+0.9
-0.2
-1.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.5
-0.1
-0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.9
-0.6
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
+1.7
-0.0
-1.7
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+1.3
-0.2
-1.1
auxotrophy
Dropout Complete
N.D.
+0.5
+1.0
-0.3
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.7
+0.5
+0.1
-0.9
auxotrophy
YNB Glucose
N.D.
+0.3
+1.1
-0.4
-0.6
growth on ypd
YPD
N.D.
+0.2
-0.6
+0.1
+0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.8
-0.1
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
+1.9
-0.3
-1.2
growth on oleic acid
YNB Oleic Acid
N.D.
+0.9
+0.1
+0.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.6
+0.9
+0.3
-0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
+2.4
-0.2
-0.5
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