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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15445 and 15446 are separated by 454 nucleotides
15446 and 15447 are separated by 462 nucleotides
15447 and 15448 are separated by 138 nucleotides
15448 and 15449 are separated by 161 nucleotides
mRNA_7077: 15445 - K18789 XGD1 xylogalacturonan beta-1,3-xylosyltransferase, at 827,085 to 831,280
15445
mRNA_7078: 15446 - Hypothetical Protein, at 831,735 to 832,558
15446
mRNA_7079: 15447 - Hypothetical Protein, at 833,021 to 833,925
15447
mRNA_7080: 15448 - K12481 RBSN, ZFYVE20 rabenosyn-5, at 834,064 to 836,328
15448
mRNA_7081: 15449 - K00272 DDO D-aspartate oxidase, at 836,490 to 837,896
15449
Group
Condition
mRNA
_7077
mRNA
_7078
mRNA
_7079
mRNA
_7080
mRNA
_7081
15445
15446
15447
15448
15449
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-1.0
+0.2
-1.1
-1.3
growth on oleic acid
YNB Glucose
+0.5
+0.3
-0.1
-2.6
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.9
-0.2
-2.8
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+1.3
-0.2
-1.5
-0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.3
-0.2
-0.5
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
+0.9
-0.2
-1.5
-0.6
growth on ricinoleic acid
YNB Glucose
+0.2
-0.3
-0.1
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.7
+0.5
+0.1
-0.9
-0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+1.7
-0.0
-1.7
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.0
-0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+1.9
-0.3
-1.2
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.9
-0.6
-0.0
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.5
-0.1
-0.1
-0.4
+0.3
auxotrophy
Dropout Complete
+0.5
+1.0
-0.3
-0.9
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
-0.1
+0.1
-0.3
-0.3
growth on ypd
YPD
+0.2
-0.6
+0.1
+0.7
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+1.3
-0.2
-1.1
+0.2
auxotrophy
YNB Glucose
+0.3
+1.1
-0.4
-0.6
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
+0.9
+0.3
-0.9
-0.1
growth on oleic acid
YNB Oleic Acid
+0.9
+0.1
+0.0
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+2.4
-0.2
-0.5
-0.1
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