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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15446 and 15447 are separated by 462 nucleotides
15447 and 15448 are separated by 138 nucleotides
15448 and 15449 are separated by 161 nucleotides
15449 and 15450 are separated by 112 nucleotides
mRNA_7078: 15446 - Hypothetical Protein, at 831,735 to 832,558
15446
mRNA_7079: 15447 - Hypothetical Protein, at 833,021 to 833,925
15447
mRNA_7080: 15448 - K12481 RBSN, ZFYVE20 rabenosyn-5, at 834,064 to 836,328
15448
mRNA_7081: 15449 - K00272 DDO D-aspartate oxidase, at 836,490 to 837,896
15449
mRNA_7082: 15450 - K20406 NPRL3 nitrogen permease regulator 3-like protein, at 838,009 to 840,569
15450
Group
Condition
mRNA
_7078
mRNA
_7079
mRNA
_7080
mRNA
_7081
mRNA
_7082
15446
15447
15448
15449
15450
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
+0.2
-1.1
-1.3
-0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.9
-0.2
-2.8
+0.5
-1.1
growth on oleic acid
YNB Glucose
+0.3
-0.1
-2.6
+0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.9
-0.2
-1.5
-0.6
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.3
-0.2
-1.5
-0.8
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.7
-0.0
-1.7
-0.3
-1.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
+0.1
-0.9
-0.9
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.9
+0.3
-0.9
-0.1
-1.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.2
-0.5
-0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.0
-0.3
+0.1
+0.0
auxotrophy
Dropout Complete
+1.0
-0.3
-0.9
-0.0
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.9
-0.3
-1.2
-0.7
-0.4
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
-0.1
-0.3
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.2
-0.1
+0.3
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.4
+0.3
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.0
-0.2
+0.4
-0.4
auxotrophy
YNB Glucose
+1.1
-0.4
-0.6
+0.3
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.1
-0.3
-0.3
+0.4
growth on ypd
YPD
-0.6
+0.1
+0.7
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+1.3
-0.2
-1.1
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+2.4
-0.2
-0.5
-0.1
+0.2
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